Year Publication Online
2017
David R, Burgess A, Parker B, Li J, Pulsford K, Sibbritt T, Preiss T, Searle IR (2017) Transcriptome-Wide Mapping of RNA 5-Methylcytosine in Arabidopsis mRNAs and Noncoding RNAs. The Plant Cell 29(3):445-460.
2017
Martin A, Brown CW, Nguyen DQ, Palmer WM, Furbank RT, Byrt CS, Lambrides CJ, Grof CPL (2017) Cell wall development in an elongating internode of setaria Genetics and Genomics of Setaria 19:211-238.
2017
Shabala S, Munns R (2017) Salinity Stress: Physiological Constraints and Adaptive Mechanisms Plant Stress Physiology Chapter 2, 2nd Edition (S. Shabala, Ed.) CAB International. pp 24-63..
2017
Li L, Nelson CJ, Trösch J, Castleden I, Huang S, Millar AH (2017) Protein Degradation Rate in <i>Arabidopsis thaliana</i> Leaf Growth and Development. The Plant Cell 29(2):207-228.
2017
Belt K, Huang S, Thatcher LF, Casarotto H, Singh K, Van Aken O, Millar AH (2017) Salicylic acid-dependent plant stress signalling via mitochondrial succinate dehydrogenase. Plant Physiology 173(4):2029-2040.
2017
Cai S, Chen G, Wang Y, Huang Y, Marchant B, Wang Y, Yang Q, Dai F, Hills A, Franks PJ, Nevo E, Soltis D, Soltis P, Sessa E, Wolf PG, Xue D, Zhang G, Pogson BJ, Blatt MR, Chen ZH (2017) Evolutionary Conservation of ABA Signaling for Stomatal Closure in Ferns. Plant Physiology 174(2):732-747.
2017
Zhang X, Ivanova A, Vandepoele K, Radomiljac J, Van De Velde J, Berkowitz O, Willems P, Xu Y, Ng S, Van Aken O, Duncan O, Zhang B, Storme V, Chan KX, Vaneechoutte D, Pogson BJ, Van Breusegem F, Whelan J, De Clercq I (2017) The Transcription Factor MYB29 Is a Regulator of <i>ALTERNATIVE OXIDASE1a</i>. Plant Physiology 173(3):1824-1843.
2017
Yue W, Ying Y, Wang C, Zhao Y, Dong C, Whelan J, Shou H (2017) OsNLA1, a RING-type ubiquitin ligase, maintains phosphate homeostasis in Oryza sativa via degradation of phosphate transporters. The Plant Journal 90(6):1040-1051.
2017
Stoll K, Jonietz C, Schleicher S, des Francs-Small CC, Small I, Binder S (2017) In Arabidopsis thaliana distinct alleles encoding mitochondrial RNA PROCESSING FACTOR 4 support the generation of additional 5' termini of ccmB transcripts. Plant Molecular Biology 93(6):659-668.
2017
Tonti-Filippini J, Nevill PG, Dixon K, Small I (2017) What can we do with 1000 plastid genomes? The Plant Journal 90(4):808-818.
2017
Blomme J, Van Aken O, Van Leene J, Jégu T, De Rycke RM, De Bruyne M, Vercruysse J, Nolf J, Van Daele T, De Milde L, Vermeersch M, Colas des Francs-Small C, De Jaeger G, Benhamed M, Millar AH, Inzé D, Gonzalez N (2017) The Mitochondrial DNA (mtDNA)-Associated Protein SWIB5 Influences mtDNA Architecture and Homologous Recombination. The Plant Cell 29(5):1137-1156.
2017
Clavijo BJ, Venturini L, Schudoma C, Accinelli GG, Kaithakottil G, Wright J, Borrill P, Kettleborough G, Heavens D, Chapman H, Lipscombe J, Barker T, Lu FH, McKenzie N, Raats D, Ramirez-Gonzalez RH, Coince A, Peel N, Percival-Alwyn L, Duncan O, Trösch J, Yu G, Bolser DM, Namaati G, Kerhornou A, Spannagl M, Gundlach H, Haberer G, Davey RP, Fosker C, Palma FD, Phillips AL, Millar AH, Kersey PJ, Uauy C, Krasileva KV, Swarbreck D, Bevan MW, Clark MD (2017) An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations. Genome Research 27(5):885-896.
2017
Scafaro AP, Negrini ACA, O'Leary B, Rashid FAA, Hayes L, Fan Y, Zhang Y, Chochois V, Badger MR, Millar AH, Atkin OK (2017) The combination of gas-phase fluorophore technology and automation to enable high-throughput analysis of plant respiration. Plant Methods 13:16.
2017
Pornsiriwong W, Estavillo GM, Chan KX, Tee EE, Ganguly D, Crisp PA, Phua SY, Zhao C, Qiu J, Park J, Yong MT, Nisar N, Yadav AK, Schwessinger B, Rathjen J, Cazzonelli CI, Wilson PB, Gilliham M, Chen ZH, Pogson BJ (2017) A chloroplast retrograde signal, 3'-phosphoadenosine 5'-phosphate, acts as a secondary messenger in abscisic acid signaling in stomatal closure and germination. eLIFE 6:.
2017
Ahrens CW, Supple MA, Aitken NC, Cantrill DJ, Borevitz JO, James EA (2017) Genomic diversity guides conservation strategies among rare terrestrial orchid species when taxonomy remains uncertain. Annals of Botany 119(8):1267-1277.
2017
Tcherkez G, Gauthier P, Buckley TN, Busch FA, Barbour MM, Bruhn D, Heskel MA, Gong XY, Crous K, Griffin KL, Way DA, Turnbull MH, Adams MA, Atkin OK, Bender M, Farquhar GD, Cornic G (2017) Tracking the origins of the Kok effect, 70 years after its discovery. The New phytologist 214(2):506-510.
2017
Fyllas NM, Bentley LP, Shenkin A, Asner GP, Atkin OK, Díaz S, Enquist BJ, Farfan-Rios W, Gloor E, Guerrieri R, Huasco WH, Ishida Y, Martin RE, Meir P, Phillips O, Salinas N, Silman M, Weerasinghe LK, Zaragoza-Castells J, Malhi Y (2017) Solar radiation and functional traits explain the decline of forest primary productivity along a tropical elevation gradient. Ecology Letters 20(6):730-740.
2017
Bose J, Munns R, Shabala S, Gilliham M, Pogson B, Tyerman SD (2017) Chloroplast function and ion regulation in plants growing on saline soils: lessons from halophytes. Journal of Experimental Botany 68(12):3129-3143.
2017
Secco D, Whelan J, Rouached H, Lister R (2017) Nutrient stress-induced chromatin changes in plants. Current Opinion in Plant Biology 39:1-7.
2017
Lee K, Han JH, Park YI, Colas des Francs-Small C, Small I, Kang H (2017) The mitochondrial pentatricopeptide repeat protein PPR19 is involved in the stabilization of NADH dehydrogenase 1 transcripts and is crucial for mitochondrial function and Arabidopsis thaliana development. The New phytologist 215(1):202-216.
2017
Linn J, Ren M, Berkowitz O, Ding W, Van Der Merwe MJ, Whelan J, Jost R (2017) Root cell-specific regulators of phosphate-dependent growth. Plant Physiology 174(3):1969-1989.
2017
Li S, Ying Y, Secco D, Wang C, Narsai R, Whelan J, Shou H (2017) Molecular interaction between PHO2 and GIGANTEA reveals a new crosstalk between flowering time and phosphate homeostasis in Oryza sativa. Plant, cell & environment 40(8):1487-1499.
2017
Jayasena AS, Fisher MF, Panero JL, Secco D, Bernath-Levin K, Berkowitz O, Taylor NL, Schilling EE, Whelan J, Mylne JS (2017) Stepwise Evolution of a Buried Inhibitor Peptide over 45 My. Molecular Biology and Evolution 34(6):1505-1516.
2017
James AM, Jayasena AS, Zhang J, Berkowitz O, Secco D, Knott GJ, Whelan J, Bond CS, Mylne JS (2017) Evidence for Ancient Origins of Bowman-Birk Inhibitors from <i>Selaginella moellendorffii</i>. The Plant Cell 29(3):461-473.
2017
Sasidharan R, Bailey-Serres J, Ashikari M, Atwell BJ, Colmer TD, Fagerstedt K, Fukao T, Geigenberger P, Hebelstrup KH, Hill RD, Holdsworth MJ, Ismail AM, Licausi F, Mustroph A, Nakazono M, Pedersen O, Perata P, Sauter M, Shih MC, Sorrell BK, Striker GG, van Dongen JT, Whelan J, Xiao S, Visser EJ, Voesenek LA (2017) Community recommendations on terminology and procedures used in flooding and low oxygen stress research. The New phytologist 214(4):1403-1407.
2017
Crous KY, Wallin G, Atkin OK, Uddling J, Af Ekenstam A (2017) Acclimation of light and dark respiration to experimental and seasonal warming are mediated by changes in leaf nitrogen in Eucalyptus globulus. Tree Physiology 37(8):1069-1083.
2017
Crous KY, O'Sullivan OS, Zaragoza-Castells J, Bloomfield KJ, Negrini ACA, Meir P, Turnbull MH, Griffin KL, Atkin OK (2017) Nitrogen and phosphorus availabilities interact to modulate leaf trait scaling relationships across six plant functional types in a controlled-environment study. The New phytologist 215(3):992-1008.
2017
Scafaro AP, Xiang S, Long BM, Bahar NHA, Weerasinghe LK, Creek D, Evans JR, Reich PB, Atkin OK (2017) Strong thermal acclimation of photosynthesis in tropical and temperate wet-forest tree species: the importance of altered Rubisco content. Global change biology 23(7):2783-2800.
2017
Sseruwagi P, Wainaina J, Ndunguru J, Tumuhimbise R, Tairo F, Guo JY, Vrielink A, Blythe A, Kinene T, De Marchi B, Kehoe MA, Tanz S, Boykin LM (2017) The first transcriptomes from field-collected individual whiteflies ( <i>Bemisia tabaci</i>, Hemiptera: Aleyrodidae):  a case study of the endosymbiont composition. Gates Open Research 1:16.
2017
Van Aken O, Pogson BJ (2017) Convergence of mitochondrial and chloroplastic ANAC017/PAP-dependent retrograde signalling pathways and suppression of programmed cell death. Cell Death & Differentiation 24(6):955-960.
2017
Manani DM, Ateka EM, Nyanjom SR, Boykin LM (2017) Phylogenetic Relationships among Whiteflies in the Bemisia tabaci (Gennadius) Species Complex from Major Cassava Growing Areas in Kenya. Insects 8(1).
2017
Waters MT, Gutjahr C, Bennett T, Nelson DC (2017) Strigolactone Signaling and Evolution. Annual Review of Plant Biology 68:291-322.
2017
Waters MT, Flematti GR, Smith SM (2017) Assaying Germination and Seedling Responses of Arabidopsis to Karrikins. Methods in Molecular Biology 1497:29-36.
2017
Xu B, Cheval C, Laohavisit A, Hocking B, Chiasson D, Olsson TSG, Shirasu K, Faulkner C, Gilliham M (2017) A calmodulin-like protein regulates plasmodesmal closure during bacterial immune responses. The New phytologist 215(1):77-84.
2017
Betts NS, Berkowitz O, Liu R, Collins HM, Skadhauge B, Dockter C, Burton RA, Whelan J, Fincher GB (2017) Isolation of Tissues and Preservation of RNA from Intact, Germinated Barley Grain. The Plant Journal 91(4):754-765.
2017
O'Leary BM, Lee CP, Atkin OK, Cheng R, Brown TB, Millar AH (2017) Variation in Leaf Respiration Rates at Night Correlates with Carbohydrate and Amino Acid Supply. Plant Physiology 174(4):2261-2273.
2017
Valensisi C, Andrus C, Buckberry S, Doni Jayavelu N, Lund RJ, Lister R, Hawkins RD (2017) Epigenomic Landscapes of hESC-Derived Neural Rosettes: Modeling Neural Tube Formation and Diseases. Cell Reports 20(6):1448-1462.
2017
Crisp PA, Ganguly DR, Smith AB, Murray KD, Estavillo GM, Searle I, Ford E, Bogdanović O, Lister R, Borevitz JO, Eichten SR, Pogson BJ (2017) Rapid Recovery Gene Downregulation during Excess-Light Stress and Recovery in Arabidopsis. The Plant Cell 29(8):1836-1863.
2017
Bogdanović O, Lister R (2017) DNA methylation and the preservation of cell identity. Current Opinion in Genetics & Development 46:9-14.
2017
Kretzmann JA, Ho D, Evans CW, Plani-Lam JHC, Garcia-Bloj B, Mohamed AE, O'Mara ML, Ford E, Tan DEK, Lister R, Blancafort P, Norret M, Iyer KS (2017) Synthetically controlling dendrimer flexibility improves delivery of large plasmid DNA. Chemical Science 8(4):2923-2930.
2017
Prunier R, Akman M, Kremer CT, Aitken N, Chuah A, Borevitz J, Holsinger KE (2017) Isolation by distance and isolation by environment contribute to population differentiation in Protea repens (Proteaceae L.), a widespread South African species. American Journal of Botany 104(5):674-684.
2017
Hafiz Che-Othman M, Harvey Millar A, Taylor NL (2017) Connecting Salt Stress Signalling Pathways with Salinity Induced Changes in Mitochondrial Metabolic Processes in C3 Plants. Plant, Cell & Environment 40(12):2875-2905.
2017
Tan HS, Jacoby RP, Ong-Abdullah M, Taylor NL, Liddell S, Chee WW, Chin CF (2017) Proteomic profiling of mature leaves from oil palm (Elaeis guineensis Jacq.). ELECTROPHORESIS 38(8):1147-1153.
2017
Hocking B, Conn SJ, Manohar M, Xu B, Athman A, Stancombe MA, Webb AR, Hirschi KD, Gilliham M (2017) Heterodimerization of Arabidopsis calcium/proton exchangers contributes to regulation of guard cell dynamics and plant defense responses. Journal of Experimental Botany 68(15):4171-4183.
2017
Selinski J, Hartmann A, Kordes A, Deckers-Hebestreit G, Whelan J, Scheibe R (2017) Analysis of Posttranslational Activation of Alternative Oxidase Isoforms. Plant Physiology 174(4):2113-2127.
2017
Reynolds KB, Taylor MC, Cullerne DP, Blanchard CL, Wood CC, Singh SP, Petrie JR (2017) A reconfigured Kennedy pathway which promotes efficient accumulation of medium-chain fatty acids in leaf oils. Plant Biotechnology Journal 15(11):1397-1408.
2017
Wege S, Gilliham M, Henderson SW (2017) Chloride: not simply a ‘cheap osmoticum’, but a beneficial plant macronutrient Journal of Experimental Botany 68(12):3057-3069.
2017
Hendrickson PG, Doráis JA, Grow EJ, Whiddon JL, Lim JW, Wike CL, Weaver BD, Pflueger C, Emery BR, Wilcox AL, Nix DA, Peterson CM, Tapscott SJ, Carrell DT, Cairns BR (2017) Conserved roles of mouse DUX and human DUX4 in activating cleavage-stage genes and MERVL/HERVL retrotransposons. Nature Genetics 49(6):925-934.
2017
Prodhan MA, Jost R, Watanabe M, Hoefgen R, Lambers H, Finnegan PM (2017) Tight control of sulfur assimilation: an adaptive mechanism for a plant from a severely phosphorus-impoverished habitat. The New phytologist 215(3):1068-1079.
2017
Hooper CM, Stevens TJ, Saukkonen A, Castleden IR, Singh P, Mann GW, Fabre B, Ito J, Deery MJ, Lilley KS, Petzold CJ, Millar AH, Heazlewood JL, Parsons HT (2017) Multiple marker abundance profiling: combining selected reaction monitoring and data-dependent acquisition for rapid estimation of organelle abundance in subcellular samples. The Plant Journal 92(6):1202-1217.
2017
Ganguly D, Crisp PA, Eichten SR, Pogson BJ (2017) The Arabidopsis DNA methylome is stable under transgenerational drought stress. Plant Physiology 175(4):1893-1912.
2017
Tcherkez G, Gauthier P, Buckley TN, Busch FA, Barbour MM, Bruhn D, Heskel MA, Gong XY, Crous KY, Griffin K, Way D, Turnbull M, Adams MA, Atkin OK, Farquhar GD, Cornic G (2017) Leaf day respiration: low CO2 flux but high significance for metabolism and carbon balance. The New phytologist 216(4):986-1001.
2017
Rogiers SY, Coetzee ZA, Walker RR, Deloire A, Tyerman SD (2017) Potassium in the Grape (Vitis vinifera L.) Berry: Transport and Function. Frontiers in Plant Science 8:1629.
2017
Narsai R, Gouil Q, Secco D, Srivastava A, Karpievitch YV, Liew LC, Lister R, Lewsey MG, Whelan J (2017) Extensive transcriptomic and epigenomic remodelling occurs during Arabidopsis thaliana germination. Genome Biology 18(1):172.
2017
Gutmann B, Royan S, Small I (2017) Protein Complexes Implicated in RNA Editing in Plant Organelles. Molecular Plant 10(10):1255-1257.
2017
Murray KD, Webers C, Ong CS, Borevitz J, Warthmann N (2017) kWIP: The k-mer weighted inner product, a de novo estimator of genetic similarity. PLoS Computational Biology 13(9):e1005727.
2017
Liu X, Nefzger CM, Rossello FJ, Chen J, Knaupp AS, Firas J, Ford E, Pflueger J, Paynter JM, Chy HS, O'Brien CM, Huang C, Mishra K, Hodgson-Garms M, Jansz N, Williams SM, Blewitt ME, Nilsson SK, Schittenhelm RB, Laslett AL, Lister R, Polo JM (2017) Comprehensive characterization of distinct states of human naive pluripotency generated by reprogramming. Nature Methods 14(11):1055-1062.
2017
Elurbe DM, Paranjpe SS, Georgiou G, van Kruijsbergen I, Bogdanovic O, Gibeaux R, Heald R, Lister R, Huynen MA, van Heeringen SJ, Veenstra GJC (2017) Regulatory remodeling in the allo-tetraploid frog Xenopus laevis. Genome Biology 18(1):198.
2017
Xie H, Konate M, Sai N, Tesfamicael KG, Cavagnaro T, Gilliham M, Breen J, Metcalfe A, Stephen JR, De Bei R, Collins C, Lopez CMR (2017) Global DNA Methylation Patterns Can Play a Role in Defining Terroir in Grapevine (Vitis vinifera cv. Shiraz). Frontiers in Plant Science 8:1860.
2017
Huntingford C, Atkin OK, Martinez-de la Torre A, Mercado LM, Heskel MA, Harper AB, Bloomfield KJ, O'Sullivan OS, Reich PB, Wythers KR, Butler EE, Chen M, Griffin KL, Meir P, Tjoelker MG, Turnbull MH, Sitch S, Wiltshire A, Malhi Y (2017) Implications of improved representations of plant respiration in a changing climate. Nature Communications 8(1):1602.
2017
Cserne Szappanos H, Muralidharan P, Ingley E, Petereit J, Millar AH, Hool LC (2017) Identification of a novel cAMP dependent protein kinase A phosphorylation site on the human cardiac calcium channel. Scientific Reports 7(1):15118.
2017
Shelden MC, Vandeleur R, Kaiser BN, Tyerman SD (2017) A Comparison of Petiole Hydraulics and Aquaporin Expression in an Anisohydric and Isohydric Cultivar of Grapevine in Response to Water-Stress Induced Cavitation. Frontiers in Plant Science 8:1893.
2017
Kourghi M, Nourmohammadi S, Pei JV, Qiu J, McGaughey S, Tyerman SD, Byrt CS, Yool AJ (2017) Divalent Cations Regulate the Ion Conductance Properties of Diverse Classes of Aquaporins. International Journal of Molecular Sciences 18(11). pii: E2323.
2017
Coupel-Ledru A, Tyerman SD, Masclef D, Lebon E, Christophe A, Edwards EJ, Simonneau T (2017) Abscisic Acid Down-Regulates Hydraulic Conductance of Grapevine Leaves in Isohydric Genotypes Only. Plant Physiology 175(3):1121-1134.
2017
Wen Z, Tyerman SD, Dechorgnat J, Ovchinnikova E, Dhugga KS, Kaiser BN (2017) Maize NPF6 Proteins Are Homologs of Arabidopsis CHL1 That Are Selective for Both Nitrate and Chloride. The Plant Cell 29(10):2581-2596.
2017
Zhou X, Fu L, Xia Y, Zheng L, Chen C, Shen Z, Chen Y (2017) Arbuscular mycorrhizal fungi enhance the copper tolerance of Tagetes patula through the sorption and barrier mechanisms of intraradical hyphae. Metallomics : integrated biometal science 9(7):936-948.
2017
Gowik U, Schulze S, Saladié M, Rolland V, Tanz SK, Westhoff P, Ludwig M (2017) A MEM1-like motif directs mesophyll cell-specific expression of the gene encoding the C4 carbonic anhydrase in Flaveria. Journal of Experimental Botany 68(2):311-320.
2017
Knaupp AS, Buckberry S, Pflueger J, Lim SM, Ford E, Larcombe MR, Rossello FJ, de Mendoza A, Alaei S, Firas J, Holmes ML, Nair SS, Clark SJ, Nefzger CM, Lister R, Polo JM (2017) Transient and Permanent Reconfiguration of Chromatin and Transcription Factor Occupancy Drive Reprogramming. Cell Stem Cell 21(6):834-845.e6.
2017
Nefzger CM, Rossello FJ, Chen J, Liu X, Knaupp AS, Firas J, Paynter JM, Pflueger J, Buckberry S, Lim SM, Williams B, Alaei S, Faye-Chauhan K, Petretto E, Nilsson SK, Lister R, Ramialison M, Powell DR, Rackham OJL, Polo JM (2017) Cell Type of Origin Dictates the Route to Pluripotency. Cell Reports 21(10):2649-2660.
2017
Butler EE, Datta A, Flores-Moreno H, Chen M, Wythers KR, Fazayeli F, Banerjee A, Atkin OK, Kattge J, Amiaud B, Blonder B, Boenisch G, Bond-Lamberty B, Brown KA, Byun C, Campetella G, Cerabolini BEL, Cornelissen JHC, Craine JM, Craven D, de Vries FT, Díaz S, Domingues TF, Forey E, González-Melo A, Gross N, Han W, Hattingh WN, Hickler T, Jansen S, Kramer K, Kraft NJB, Kurokawa H, Laughlin DC, Meir P, Minden V, Niinemets Ü, Onoda Y, Peñuelas J, Read Q, Sack L, Schamp B, Soudzilovskaia NA, Spasojevic MJ, Sosinski E, Thornton PE, Valladares F, van Bodegom PM, Williams M, Wirth C, Reich PB (2017) Mapping local and global variability in plant trait distributions. Proceedings of the National Academy of Sciences of the United States of America 114(51):E10937-E10946.
2017
Ateka E, Alicai T, Ndunguru J, Tairo F, Sseruwagi P, Kiarie S, Makori T, Kehoe MA, Boykin LM (2017) Unusual occurrence of a DAG motif in the Ipomovirus Cassava brown streak virus and implications for its vector transmission. PLoS ONE 12(11):e0187883.
2017
Rowland L, Zaragoza-Castells J, Bloomfield KJ, Turnbull MH, Bonal D, Burban B, Salinas N, Cosio E, Metcalfe DJ, Ford A, Phillips OL, Atkin OK, Meir P (2017) Scaling leaf respiration with nitrogen and phosphorus in tropical forests across two continents. The New phytologist 214(3):1064-1077.
2017
Grassl J, Peng Y, Baer-Imhoof B, Welch M, Millar AH, Baer B (2017) Infections with the sexually transmitted pathogen <i>Nosema apis</i> trigger an immune response in the seminal fluid of honey bees (<i>Apis mellifera</i>). J. Proteome Research 16(1):319-334.
2017
Bahar NH, Ishida FY, Weerasinghe LK, Guerrieri R, O'Sullivan OS, Bloomfield KJ, Asner GP, Martin RE, Lloyd J, Malhi Y, Phillips OL, Meir P, Salinas N, Cosio EG, Domingues TF, Quesada CA, Sinca F, Escudero Vega A, Zuloaga Ccorimanya PP, Del Aguila-Pasquel J, Quispe Huaypar K, Cuba Torres I, Butrón Loayza R, Pelaez Tapia Y, Huaman Ovalle J, Long BM, Evans JR, Atkin OK (2017) Leaf-level photosynthetic capacity in lowland Amazonian and high-elevation Andean tropical moist forests of Peru. The New phytologist 214(3):1002-1018.
2017
Kantarski T, Larson S, Zhang X, DeHaan L, Borevitz J, Anderson J, Poland J (2017) Development of the first consensus genetic map of intermediate wheatgrass (Thinopyrum intermedium) using genotyping-by-sequencing. Theoretical and Applied Genetics 130(1):137-150.
2017
Duncan O, Trösch J, Fenske R, Taylor NL, Millar AH (2017) Mapping the Triticum aestivum proteome. The Plant Journal 89(3):601-616.
2017
Li L, Nelson C, Fenske R, Trösch J, Pružinská A, Millar AH, Huang S (2017) Changes in specific protein degradation rates in Arabidopsis thaliana reveal multiple roles of Lon1 in mitochondrial protein homeostasis. The Plant Journal 89(3):458-471.
2017
Rodríguez-Calcerrada J, Li M, López R, Cano FJ, Oleksyn J, Atkin OK, Pita P, Aranda I, Gil L (2017) Drought-induced shoot dieback starts with massive root xylem embolism and variable depletion of nonstructural carbohydrates in seedlings of two tree species. The New phytologist 213(2):597-610.
2017
O'sullivan OS, Heskel MA, Reich PB, Tjoelker MG, Weerasinghe LK, Penillard A, Zhu L, Egerton JJ, Bloomfield KJ, Creek D, Bahar NH, Griffin KL, Hurry V, Meir P, Turnbull MH, Atkin OK (2017) Thermal limits of leaf metabolism across biomes. Global change biology 23(1):209-223.
2017
Byrt CS, Zhao M, Kourghi M, Bose J, Henderson SW, Qiu J, Gilliham M, Schultz C, Schwarz M, Ramesh SA, Yool A, Tyerman S (2017) Non-selective cation channel activity of aquaporin AtPIP2;1 regulated by Ca(2+) and pH. Plant, Cell & Environment 40(6):802-815.
2017
Zhao M, Tan HT, Scharwies J, Levin K, Evans JR, Tyerman SD (2017) Association between water and carbon dioxide transport in leaf plasma membranes: assessing the role of aquaporins. Plant, Cell & Environment 40(6):789-801.
2017
Elliott AG, Franke B, Armstrong DA, Craik DJ, Mylne JS, Rosengren KJ (2017) Natural structural diversity within a conserved cyclic peptide scaffold. Amino Acids 49(1):103-116.
2017
Alexova R, Nelson CJ, Millar AH (2017) Temporal development of the barley leaf metabolic response to P<sub>i</sub> limitation. Plant, cell & environment 40(5):645-657.
2017
Gilliham M, Able JA, Roy SJ (2017) Translating knowledge in abiotic stress tolerance to breeding programs. The Plant Journal 90(5):898-917.
2017
Jaime-Pérez N, Pineda B, García-Sogo B, Atares A, Athman A, Byrt CS, Olías R, Asins MJ, Gilliham M, Moreno V, Belver A (2017) The sodium transporter encoded by the HKT1;2 gene modulates sodium/potassium homeostasis in tomato shoots under salinity. Plant, Cell & Environment 40(5):658-671.
2017
Narsai R, Secco D, Schultz MD, Ecker JR, Lister R, Whelan J (2017) Dynamic and rapid changes in the transcriptome and epigenome during germination and in developing rice (Oryza sativa) coleoptiles under anoxia and re-oxygenation. The Plant Journal 89(4):805-824.
2017
Aryamanesh N, Ruwe H, Sanglard LV, Eshraghi L, Bussell JD, Howell KA, Small I, Des Francs-Small CC (2017) The Pentatricopeptide Repeat Protein EMB2654 Is Essential for Trans-Splicing of a Chloroplast Small Ribosomal Subunit Transcript. Plant Physiology 173(2):1164-1176.
2017
Cognat V, Morelle G, Megel C, Lalande S, Molinier J, Vincent T, Small I, Duchêne AM, Maréchal-Drouard L (2017) The nuclear and organellar tRNA-derived RNA fragment population in Arabidopsis thaliana is highly dynamic. Nucleic Acids Research 45(6):3460-3472.
2017
Ramesh SA, Tyerman SD, Gilliham M, Xu B (2017) γ-Aminobutyric acid (GABA) signalling in plants. Cellular and Molecular Life Sciences 74(9):1577-1603.
2017
Scharwies JD, Tyerman SD (2017) Comparison of isohydric and anisohydric Vitis vinifera L. cultivars reveals a fine balance between hydraulic resistances, driving forces and transpiration in ripening berries Functional Plant Biology 44(3):324-338.
2017
Malhi Y, Girardin CA, Goldsmith GR, Doughty CE, Salinas N, Metcalfe DB, Huaraca Huasco W, Silva-Espejo JE, Del Aguilla-Pasquell J, Farfán Amézquita F, Aragão LE, Guerrieri R, Ishida FY, Bahar NH, Farfan-Rios W, Phillips OL, Meir P, Silman M (2017) The variation of productivity and its allocation along a tropical elevation gradient: a whole carbon budget perspective. The New phytologist 214(3):1019-1032.
2016
Peng Y, Grassl J, Millar AH, Baer B (2016) Seminal fluid of honeybees contains multiple mechanisms to combat infections of the sexually transmitted pathogen Nosema apis. Proceedings Of The Royal Society B 283(1823).
2016
Jayasena AS, Franke B, Rosengren J, Mylne JS (2016) A tripartite approach identifies the major sunflower seed albumins Theoretical and Applied Genetics 129(3):613-29.
2016
Hsieh YS, Zhang Q, Yap K, Shirley NJ, Lahnstein J, Nelson CJ, Burton RA, Millar AH, Bulone V, Fincher GB (2016) Genetics, Transcriptional Profiles, and Catalytic Properties of the UDP-Arabinose Mutase Family from Barley. Biochemistry 55(2):322-34.
2016
Ströher E, Grassl J, Carrie C, Fenske R, Whelan J, Millar AH (2016) Glutaredoxin S15 Is Involved in Fe-S Cluster Transfer in Mitochondria Influencing Lipoic Acid-Dependent Enzymes, Plant Growth, and Arsenic Tolerance in Arabidopsis. Plant Physiology 170(3):1284-99.
2016
Cheng S, Gutmann B, Zhong X, Ye Y, Fisher MF, Bai F, Castleden I, Song Y, Song B, Huang J, Liu X, Xu X, Lim BL, Bond CS, Yiu SM, Small I (2016) Redefining the structural motifs that determine RNA binding and RNA editing by pentatricopeptide repeat proteins in land plants. The Plant Journal 85(4):532-47.
2016
Baby T, Collins C, Tyerman SD, Gilliham M (2016) Salinity Negatively Affects Pollen Tube Growth and Fruit Set in Grapevines and Cannot Be Ameliorated by Silicon American Journal of Enology and Viticulture 67:218-228.
2016
Nagarajan Y, Rongala J, Luang S, Singh A, Shadiac N, Hayes J, Sutton T, Gilliham M, Tyerman S, McPhee G, Voelcker NH, Mertens HD, Kirby N, Lee JG, Yingling YG, Hrmova M (2016) Na+-Dependent Anion Transport by a Barley Efflux Protein Revealed through an Integrative Platform. The Plant Cell 28(1):202-18.
2016
Wege S, Khan GA, Jung JY, Vogiatzaki E, Pradervand S, Aller I, Meyer AJ, Poirier Y (2016) The EXS Domain of PHO1 Participates in the Response of Shoots to Phosphate Deficiency via a Root-to-Shoot Signal. Plant Physiology 170(1):385-400.
2016
Williams AV, Miller JT, Small I, Nevill PG, Boykin LM (2016) Integration of complete chloroplast genome sequences with small amplicon datasets improves phylogenetic resolution in Acacia. Molecular Phylogenetics and Evolution 96:1-8.
2016
Harper AB, Cox PM, Friedlingstein P, Wiltshire AJ, Jones CD, Sitch S, Mercado LM, Groenendijk M, Robertson E, Kattge J, Bönisch G, Atkin OK, Bahn M, Cornelissen J, Niinemets Ü, Onipchenko V, Peñuelas J, Poorter L, Reich, PB, Soudzilovskaia NA Bodegom PV (2016) Improved representation of plant functional types and physiology in the Joint UK Land Environment Simulator (JULES v4.2) using plant trait information. Geoscientific Model Development 9:2415-2440.
2016
Carmody M, Waszczak C, Idänheimo N, Saarinen T, Kangasjärvi J (2016) ROS signalling in a destablised world: A molecule understanding of climate change J. Plant Physiol 203:69-83.
2016
Roy SJ, Collins NC, Munns R (2016) Abiotic stress genes and mechanisms in wheat Encyclopedia of Food Grains, 2nd Edition 4:393-397.
2016
Wang Y, Lyu W, Berkowitz O, Radomiljac JD, Law SR, Murcha MW, Carrie C, Teixeira PF, Kmiec B, Duncan O, Van Aken O, Narsai R, Glaser E, Huang S, Roessner U, Millar AH, Whelan J (2016) Inactivation of Mitochondrial Complex I Induces the Expression of a Twin Cysteine Protein that Targets and Affects Cytosolic, Chloroplastidic and Mitochondrial Function. Molecular Plant 9(5):696-710.
2016
Selinski J, Hartmann A, Höfler S, Deckers-Hebestreit G, Scheibe R (2016) Refined method to study the posttranslational regulation of alternative oxidases from Arabidopsis thaliana in vitro Physiologia Plantarum 157(3):264-79.
2016
Shelden MC, Dias DA, Jayasinghe NS, Bacic A, Roessner U (2016) Root spatial metabolite profiling of two genotypes of barley (Hordeum vulgare L.) reveals differences in response to short-term salt stress Journal of Experimental Botany 67(12):3731-45.
2016
Setter TL, Waters I, Stefanova K, Munns R, Barrett-Lennard EG (2016) Salt tolerance, date of flowering and rain affect the productivity of wheat and barley on rainfed saline land. Field Crops Research 194:31-42.
2016
Dosselli R, Grassl J, Carson A, Simmons LW, Baer B (2016) Flight behaviour of honey bee (Apis mellifera) workers is altered by initial infections of the fungal parasite Nosema apis Scientific Reports 6:36649.
2016
Flematti GR, Scaffidi A, Waters MT, Smith SM (2016) Stereospecificity in strigolactone biosynthesis and perception. Planta 243(6):1361-73.
2016
Zhu M, Shabala L, Cuin TA, Huang X, Zhou M, Munns R, Shabala S (2016) Nax loci affect SOS1-like Na+/H+ exchanger expression and activity in wheat. Journal of Experimental Botany 67(3):835-44.
2016
Nicotra AB, Chong C, Bragg JG, Ong CR, Aitken NC, Chuah A, Lepschi B, Borevitz JO (2016) Population and phylogenomic decomposition via genotyping-by-sequencing in Australian Pelargonium. Molecular Ecology 25(9):2000-14.
2016
Chan KX, Phua SY, Crisp P, McQuinn R, Pogson BJ (2016) Learning the Languages of the Chloroplast: Retrograde Signaling and Beyond. Annual Review of Plant Biology 29;67:25-53.
2016
Bowerman AF, Newberry M, Dielen AS, Whan A, Larroque O, Pritchard J, Gubler F, Howitt CA, Pogson BJ, Morell MK, Ral JP (2016) Suppression of glucan, water dikinase in the endosperm alters wheat grain properties, germination and coleoptile growth. Plant Biotechnology Journal 14(1):398-408.
2016
Jacoby RP, Che-Othman MH, Millar AH, Taylor NL (2016) Analysis of the sodium chloride-dependent respiratory kinetics of wheat mitochondria reveals differential effects on phosphorylating and non-phosphorylating electron transport pathways. Plant, cell & environment 39(4):823-33.
2016
Baer B, Millar AH (2016) Proteomics in evolutionary ecology. Journal of Proteomics 135:4-11.
2016
Hooper CM, Castleden IR, Aryamanesh N, Jacoby RP, Millar AH (2016) Finding the Subcellular Location of Barley, Wheat, Rice and Maize Proteins: The Compendium of Crop Proteins with Annotated Locations (cropPAL). Plant and Cell Physiology 57(1):e9.
2016
Gilliham M, Tyerman SD (2016) Linking Metabolism to Membrane Signaling: The GABA-Malate Connection. Trends in Plant Science 21(4):295-301.
2016
Haïli N, Planchard N, Arnal N, Quadrado M, Vrielynck N, Dahan J, Francs-Small CC, Mireau H (2016) The MTL1 Pentatricopeptide Repeat Protein Is Required for Both Translation and Splicing of the Mitochondrial NADH DEHYDROGENASE SUBUNIT7 mRNA in Arabidopsis. Plant Physiology 170(1):354-66.
2016
Evans-Roberts KM, Mitchenall LA, Wall MK, Leroux J, Mylne JS, Maxwell A (2016) DNA Gyrase Is the Target for the Quinolone Drug Ciprofloxacin in Arabidopsis thaliana. The Journal of Biological Chemistry 291(7):3136-44.
2016
De Kauwe MG, Lin YS, Wright IJ, Medlyn BE, Crous KY, Ellsworth DS, Maire V, Prentice IC, Atkin OK, Rogers A, Niinemets Ü, Serbin SP, Meir P, Uddling J, Togashi HF, Tarvainen L, Weerasinghe LK, Evans BJ, Ishida FY, Domingues TF (2016) A test of the 'one-point method' for estimating maximum carboxylation capacity from field-measured, light-saturated photosynthesis. The New phytologist 210(3):1130-44.
2016
Bruggeman Q, Mazubert C, Prunier F, Lugan R, Chan KX, Phua SY, Pogson BJ, Krieger-Liszkay A, Delarue M, Benhamed M, Bergounioux C, Raynaud C (2016) Chloroplast Activity and 3'phosphadenosine 5'phosphate Signaling Regulate Programmed Cell Death in Arabidopsis. Plant Physiology 170(3):1745-56.
2016
Berkowitz O, De Clercq I, Van Breusegem F, Whelan J (2016) Interaction between hormonal and mitochondrial signalling during growth, development and in plant defence responses. Plant, Cell & Environment 39(5):1127-39.
2016
Shabala S, Wu H, Bose J (2016) Salt stress sensing and early signalling events in plant roots: Current knowledge and hypothesis. Plant Science 241:109-19.
2016
Wilson R, Golub SB, Rowley L, Angelucci C, Karpievitch YV, Bateman JF, Fosang AJ (2016) Novel Elements of the Chondrocyte Stress Response Identified Using an in Vitro Model of Mouse Cartilage Degradation. J. Proteome Research 15(3):1033-50.
2016
Wu W, Liu S, Ruwe H, Zhang D, Melonek J, Zhu Y, Hu X, Gusewski S, Yin P, Small ID, Howell KA, Huang J (2016) SOT1, a pentatricopeptide repeat protein with a small MutS-related domain, is required for correct processing of plastid 23S-4.5S rRNA precursors in Arabidopsis thaliana. The Plant Journal 85(5):607-21.
2016
Taylor CM, Jost R, Erskine W, Nelson MN (2016) Identifying Stable Reference Genes for qRT-PCR Normalisation in Gene Expression Studies of Narrow-Leafed Lupin (Lupinus angustifolius L.). PLoS ONE 11(2):e0148300.
2016
de Mendoza A, Jones JW, Friedrich M (2016) Methuselah/Methuselah-like G protein-coupled receptors constitute an ancient metazoan gene family. Scientific Reports 6:21801.
2016
Jacoby RP, Millar AH, Taylor NL (2016) Opportunities for wheat proteomics to discover the biomarkers for respiration-dependent biomass production, stress tolerance and cytoplasmic male sterility. Journal of Proteomics 143:36-44.
2016
Bogdanović O, Smits AH, de la Calle Mustienes E, Tena JJ, Ford E, Williams R, Senanayake U, Schultz MD, Hontelez S, van Kruijsbergen I, Rayon T, Gnerlich F, Carell T, Veenstra GJ, Manzanares M, Sauka-Spengler T, Ecker JR, Vermeulen M, Gómez-Skarmeta JL, Lister R (2016) Active DNA demethylation at enhancers during the vertebrate phylotypic period. Nature Genetics 48(4):417-26.
2016
Mo A, Luo C, Davis FP, Mukamel EA, Henry GL, Nery JR, Urich MA, Picard S, Lister R, Eddy SR, Beer MA, Ecker JR, Nathans J (2016) Epigenomic landscapes of retinal rods and cones. eLIFE 5:e11613.
2016
Melonek J, Oetke S, Krupinska K (2016) Multifunctionality of plastid nucleoids as revealed by proteome analyses. Biochimica et Biophysica Acta - General Subjects 1864(8):1016-38.
2016
Crisp PA, Ganguly D, Eichten SR, Borevitz JO, Pogson BJ (2016) Reconsidering plant memory: Intersections between stress recovery, RNA turnover, and epigenetics. Science Advances 2(2):e1501340.
2016
Heskel MA, O'Sullivan OS, Reich PB, Tjoelker MG, Weerasinghe LK, Penillard A, Egerton JJ, Creek D, Bloomfield KJ, Xiang J, Sinca F, Stangl ZR, Martinez-de la Torre A, Griffin KL, Huntingford C, Hurry V, Meir P, Turnbull MH, Atkin OK (2016) Convergence in the temperature response of leaf respiration across biomes and plant functional types. Proceedings of the National Academy of Sciences of the United States of America 113(14):3832-7.
2016
Bianco-Miotto T, Mayne B, Buckberry S, Breen J, Rodriguez Lopez C, Roberts C (2016) Recent progress towards understanding the role of DNA methylation in human placental development. Reproduction 152(1):R23-30.
2016
Amarasinghe S, Watson-Haigh NS, Gilliham M, Roy S, Baumann U (2016) The evolutionary origin of CIPK16: A gene involved in enhanced salt tolerance. Molecular Phylogenetics and Evolution 100:135-47.
2016
Kmiec B, Teixeira PF, Murcha MW, Glaser E (2016) Divergent evolution of the M3A family of metallopeptidases in plants. Physiologia Plantarum 157(3):380-8.
2016
De Bei R, Fuentes S, Gilliham M, Tyerman S, Edwards E, Bianchini N, Smith J, Collins C (2016) VitiCanopy: A Free Computer App to Estimate Canopy Vigor and Porosity for Grapevine. Sensors 16(4). pii: E585.
2016
Yin G, Whelan J, Wu S, Zhou J, Chen B, Chen X, Zhang J, He J, Xin X, Lu X (2016) Comprehensive Mitochondrial Metabolic Shift during the Critical Node of Seed Ageing in Rice. PLoS ONE 11(4):e0148013.
2016
Scafaro AP, Gallé A, Van Rie J, Carmo-Silva E, Salvucci ME, Atwell BJ (2016) Heat tolerance in a wild Oryza species is attributed to maintenance of Rubisco activation by a thermally stable Rubisco activase ortholog. The New phytologist 211(3):899-911.
2016
Lee CP, Millar AH (2016) The Plant Mitochondrial Transportome: Balancing Metabolic Demands with Energetic Constraints. Trends in Plant Science 21(8):662-676.
2016
Franke B, Colgrave ML, Mylne JS, Rosengren KJ (2016) Mature forms of the major seed storage albumins in sunflower: A mass spectrometric approach. Journal of Proteomics 147:177-86.
2016
Brewer PB, Yoneyama K, Filardo F, Meyers E, Scaffidi A, Frickey T, Akiyama K, Seto Y, Dun EA, Cremer JE, Kerr SC, Waters MT, Flematti GR, Mason MG, Weiller G, Yamaguchi S, Nomura T, Smith SM, Yoneyama K, Beveridge CA (2016) LATERAL BRANCHING OXIDOREDUCTASE acts in the final stages of strigolactone biosynthesis in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America 113(22):6301-6.
2016
Hocking B, Tyerman SD, Burton RA, Gilliham M (2016) Fruit Calcium: Transport and Physiology. Frontiers in Plant Science 7:569.
2016
Sew YS, Stroher E, Fenske R, Millar AH (2016) Loss of mitochondrial malate dehydrogenase activity alters seed metabolism impairing seed maturation and post-germination growth in Arabidopsis. Plant Physiology 171(2):849-63.
2016
Van Aken O, De Clercq I, Ivanova A, Law SR, Van Breusegem F, Millar AH, Whelan J (2016) Mitochondrial and Chloroplast Stress Responses Are Modulated in Distinct Touch and Chemical Inhibition Phases. Plant Physiology 171(3):2150-65.
2016
Huang S, Van Aken O, Schwarzländer M, Belt K, Millar AH (2016) Roles of mitochondrial reactive oxygen species in cellular signalling and stress response in plants. Plant Physiology 171(3):1551-9.
2016
Sack L, Ball MC, Brodersen C, Davis SD, Des Marais DL, Donovan LA, Givnish TJ, Hacke UG, Huxman T, Jansen S, Jacobsen AL, Johnson D, Koch GW, Maurel C, McCulloh KA, McDowell NG, McElrone A, Meinzer FC, Melcher PJ, North G, Pellegrini M, Pockman WT, Pratt RB, Sala A, Santiago LS, Savage JA, Scoffoni C, Sevanto S, Sperry J, Tyerman SD, Way D, Holbrook NM (2016) Plant hydraulics as a central hub integrating plant and ecosystem function: meeting report for "Emerging Frontiers in Plant Hydraulics" (Washington, DC, May 2015). Plant, Cell & Environment 39(9):2085-94.
2016
Hontelez S, van Kruijsbergen I, Georgiou G, van Heeringen SJ, Bogdanovic O, Lister R, Veenstra GJ (2016) Erratum: Embryonic transcription is controlled by maternally defined chromatin state. Nature Communications 7:12208.
2016
Kawakatsu T, Stuart T, Valdes M, Breakfield N, Schmitz RJ, Nery JR, Urich MA, Han X, Lister R, Benfey PN, Ecker JR (2016) Unique cell-type-specific patterns of DNA methylation in the root meristem. Nature Plants 2(5):16058.
2016
Hou X, Rivers J, León P, McQuinn RP, Pogson BJ (2016) Synthesis and Function of Apocarotenoid Signals in Plants. Trends in Plant Science 21(9):792-803.
2016
Carmody M, Crisp PA, D'Alessandro S, Ganguly D, Gordon M, Havaux M, Albrecht-Borth V, Pogson BJ (2016) Uncoupling High Light Responses from Singlet Oxygen Retrograde Signaling and Spatial-Temporal Systemic Acquired Acclimation. Plant Physiology 171(3):1734-49.
2016
Atkin O (2016) New Phytologist: bridging the 'plant function - climate modelling divide'. The New phytologist 209(4):1329-32.
2016
Qiu J, Henderson SW, Tester M, Roy SJ, Gilliham M (2016) SLAH1, a homologue of the slow type anion channel SLAC1, modulates shoot Cl- accumulation and salt tolerance in Arabidopsis thaliana. Journal of Experimental Botany 67(15):4495-505.
2016
Li B, Byrt C, Qiu J, Baumann U, Hrmova M, Evrard A, Johnson AA, Birnbaum KD, Mayo GM, Jha D, Henderson SW, Tester M, Gilliham M, Roy SJ (2016) Identification of a Stelar-Localized Transport Protein That Facilitates Root-to-Shoot Transfer of Chloride in Arabidopsis. Plant Physiology 170(2):1014-29.
2016
Chan KX, Mabbitt PD, Phua SY, Mueller JW, Nisar N, Gigolashvili T, Stroeher E, Grassl J, Arlt W, Estavillo GM, Jackson CJ, Pogson BJ (2016) Sensing and signaling of oxidative stress in chloroplasts by inactivation of the SAL1 phosphoadenosine phosphatase. Proceedings of the National Academy of Sciences of the United States of America 113(31):E4567-76.
2016
Van Aken O, Ford E, Lister R, Huang S, Millar AH (2016) Retrograde signalling caused by heritable mitochondrial dysfunction is partially mediated by ANAC017 and improves plant performance. The Plant Journal 88(4):542-558.
2016
Lee CP, Maksaev G, Jensen GS, Murcha MW, Wilson ME, Fricker M, Hell R, Haswell ES, Millar AH, Sweetlove L (2016) MSL1 is a mechanosensitive ion channel that dissipates mitochondrial membrane potential and maintains redox homeostasis in mitochondria during abiotic stress. The Plant Journal 88(5):809-825.
2016
Hu Z, Vanderhaeghen R, Cools T, Wang Y, De Clercq I, Leroux O, Nguyen L, Belt K, Millar AH, Audenaert D, Hilson P, Small ID, Mouille G, Vernhettes S, Van Breusegem F, Whelan J, Höfte H, De Veylder L (2016) Mitochondrial Defects Confer Tolerance against Cellulose Deficiency. The Plant Cell 28(9):2276-2290.
2016
Franke B, Jayasena AS, Fisher MF, Swedberg JE, Taylor NL, Mylne JS, Rosengren KJ (2016) Diverse cyclic seed peptides in the Mexican zinnia (Zinnia haageana). Biopolymers Peptide Science 106(6):806-817.
2016
O'Leary BM, Neale HC, Geilfus CM, Jackson RW, Arnold DL, Preston GM (2016) Early changes in apoplast composition associated with defence and disease in interactions between Phaseolus vulgaris and the halo blight pathogen Pseudomonas syringae Pv. phaseolicola. Plant, Cell & Environment 39(10):2172-84.
2016
Eichten SR, Stuart T, Srivastava A, Lister R, Borevitz JO (2016) DNA methylation profiles of diverse Brachypodium distachyon align with underlying genetic diversity. Genome Research 26(11):1520-1531.
2016
Heskel MA, Atkin OK, O'Sullivan OS, Reich P, Tjoelker MG, Weerasinghe LK, Penillard A, Egerton JJ, Creek D, Bloomfield KJ, Xiang J, Sinca F, Stangl ZR, Martinez-de la Torre A, Griffin KL, Huntingford C, Hurry V, Meir P, Turnbull MH (2016) Reply to Adams et al.: Empirical versus process-based approaches to modeling temperature responses of leaf respiration. Proceedings of the National Academy of Sciences of the United States of America 113(41):E5996-E5997.
2016
Lu L, Qiu W, Gao W, Tyerman SD, Shou H, Wang C (2016) OsPAP10c, a novel secreted acid phosphatase in rice, plays an important role in the utilization of external organic phosphorus. Plant, Cell & Environment 39(10):2247-59.
2016
Rungrat T, Awlia M, Brown T, Cheng R, Sirault X, Fajkus J, Trtilek M, Furbank B, Badger M, Tester M, Pogson BJ, Borevitz JO, Wilson P (2016) Using Phenomic Analysis of Photosynthetic Function for Abiotic Stress Response Gene Discovery. Arabidopsis Book 14:e0185.
2016
Melonek J, Stone JD, Small I (2016) Evolutionary plasticity of restorer-of-fertility-like proteins in rice. Scientific Reports 6:35152.
2016
Liu Y, Yu L, Qu Y, Chen J, Liu X, Hong H, Liu Z, Chang R, Gilliham M, Qiu L, Guan R (2016) GmSALT3, Which Confers Improved Soybean Salt Tolerance in the Field, Increases Leaf Cl(-) Exclusion Prior to Na(+) Exclusion But Does Not Improve Early Vigor under Salinity. Frontiers in Plant Science 7:1485.
2016
Li L, Kubiszewski-Jakubiak S, Radomiljac J, Wang Y, Law SR, Keech O, Narsai R, Berkowitz O, Duncan O, Murcha MW, Whelan J (2016) Characterization of a novel β-barrel protein (AtOM47) from the mitochondrial outer membrane of Arabidopsis thaliana. Journal of Experimental Botany 67(21):6061-6075.
2016
Murcha MW, Kubiszewski-Jakubiak S, Teixeira PF, Gügel IL, Kmiec B, Narsai R, Ivanova A, Megel C, Schock A, Kraus S, Berkowitz O, Glaser E, Philippar K, Maréchal-Drouard L, Soll J, Whelan J (2016) Plant-Specific Preprotein and Amino Acid Transporter Proteins Are Required for tRNA Import into Mitochondria. Plant Physiology 172(4):2471-2490.
2016
Chrobok D, Law SR, Brouwer B, Lindén P, Ziolkowska A, Liebsch D, Narsai R, Szal B, Moritz T, Rouhier N, Whelan J, Gardeström P, Keech O (2016) Dissecting the Metabolic Role of Mitochondria during Developmental Leaf Senescence. Plant Physiology 172(4):2132-2153.
2016
Kurze C, Dosselli R, Grassl J, Le Conte Y, Kryger P, Baer B, Moritz RF (2016) Differential proteomics reveals novel insights into Nosema-honey bee interactions. Insect Biochemistry and Molecular Biology 79:42-49.
2016
Session AM, Uno Y, Kwon T, Chapman JA, Toyoda A, Takahashi S, Fukui A, Hikosaka A, Suzuki A, Kondo M, Van Heeringen SJ, Quigley I, Heinz S, Ogino H, Ochi H, Hellsten U, Lyons JB, Simakov O, Putnam N, Stites J, Kuroki Y, Tanaka T, Michiue T, Watanabe M, Bogdanovic O, Lister R, Georgiou G, Paranjpe SS, Van Kruijsbergen I, Shu S, Carlson J, Kinoshita T, Ohta Y, Mawaribuchi S, Jenkins J, Grimwood J, Schmutz J, Mitros T, Mozaffari SV, Suzuki Y, Haramoto Y, Yamamoto TS, Takagi C, Heald R, Miller K, Haudenschild C, Kitzman J, Nakayama T, Izutsu Y, Robert J, Fortriede J, Burns K, Lotay V, Karimi K, Yasuoka Y, Dichmann DS, Flajnik MF, Houston DW, Shendure J, Dupasquier L, Vize PD, Zorn AM, Ito M, Marcotte EM, Wallingford JB, Ito Y, Asashima M, Ueno N, Matsuda Y, Veenstra GJ, Fujiyama A, Harland RM, Taira M, Rokhsar DS (2016) Genome evolution in the allotetraploid frog Xenopus laevis. Nature 538(7625):336-343.
2016
Morris GP, Hu Z, Grabowski PP, Borevitz JO, de Graaff MA, Miller RM, Jastrow JD (2016) Genotypic diversity effects on biomass production in native perennial bioenergy cropping systems. Global Change Biology. Bioenergy 8(5):1000-1014.
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Liberti J, Baer B, Boomsma JJ (2016) Queen reproductive tract secretions enhance sperm motility in ants. Biology Letters 12(11).
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Baer B, Collins J, Maalaps K, den Boer SP (2016) Sperm use economy of honeybee (Apis mellifera) queens. Ecology and Evolution 6(9):2877-85.
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Bogdanovic O, van Heeringen SJ (2016) ChIP-seq Data Processing for PcG Proteins and Associated Histone Modifications. Methods in Molecular Biology 1480:37-53.
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Kariman K, Barker SJ, Jost R, Finnegan PM, Tibbett M (2016) Sensitivity of jarrah (Eucalyptus marginata) to phosphate, phosphite, and arsenate pulses as influenced by fungal symbiotic associations. Mycorrhiza 26(5):401-15.
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Munns R, James RA, Gilliham M, Flowers TJ, Colmer TD (2016) Tissue tolerance: an essential but elusive trait for salt-tolerant crops Functional Plant Biology 43:1103-1113.
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Stuart T, Eichten SR, Cahn J, Karpievitch YV, Borevitz JO, Lister R (2016) Population scale mapping of transposable element diversity reveals links to gene regulation and epigenomic variation. eLIFE 5. pii: e20777.
2016
Passman AM, Low J, London R, Tirnitz-Parker JE, Miyajima A, Tanaka M, Strick-Marchand H, Darlington GJ, Finch-Edmondson M, Ochsner S, Zhu C, Whelan J, Callus BA, Yeoh GC (2016) A Transcriptomic Signature of Mouse Liver Progenitor Cells. Stem Cells International 2016:5702873.
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Byrt CS, Betts NS, Tan HT, Lim WL, Ermawar RA, Nguyen HY, Shirley NJ, Lahnstein J, Corbin K, Fincher GB, Knauf V, Burton RA (2016) Prospecting for Energy-Rich Renewable Raw Materials: Sorghum Stem Case Study PLoS ONE 11(5):e0156638.
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McGaughey SA, Osborn HL, Chen L, Pegler JL, Tyerman SD, Furbank RT, Byrt CS, Grof CP (2016) Roles of Aquaporins in Setaria viridis Stem Development and Sugar Storage Frontiers in Plant Science 7;1815.
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Corbin KR, Betts NS, van Holst N, Jiranek V, Chambers D, Byrt CS, Fincher GB, Burton RA (2016) Low-Input Fermentations of Agave tequilana Leaf Juice Generate High Returns on Ethanol Yields Bioenergy Research 9:1142.
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Chakraborty K, Bose J, Shabala L, Shabala S (2016) Difference in root K+ retention ability and reduced sensitivity of K+-permeable channels to reactive oxygen species confer differential salt tolerance in three Brassica species Journal of Experimental Botany 67.
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Manalil S, Coast O, Werth J, Chauhan BS (2016) Weed management in cotton (Gossypium hirsutum L.) through weed-crop competition: A review Crop Protection 95:53-59.
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Proust H, Honkanen S, Jones VA, Morieri G, Prescott H, Kelly S, Ishizaki K, Kohchi T, Dolan L (2016) RSL Class I Genes Controlled the Development of Epidermal Structures in the Common Ancestor of Land Plants. Current Biology 26(1):93-9.
2016
Coast O, Murdoch AJ, Ellis RH, Hay FR, Jagadish KS (2016) Resilience of rice (Oryza spp.) pollen germination and tube growth to temperature stress. Plant, Cell & Environment 39(1):26-37.
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Shabala L, Zhang J, Pottosin II, Bose J, Zhu M, Fuglsang AT, Velarde-Buendia A, Massart A, Hill CB, Roessner U, Bacic A, Wu H, Azzarello E, Pandolfi C, Zhou M, Poschenrieder C, Mancuso S, Shabala S (2016) Cell-Type-Specific H+-ATPase Activity in Root Tissues Enables K+ Retention and Mediates Acclimation of Barley (Hordeum vulgare) to Salinity Stress Plant Physiology 172(4):2445-2458.
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Shabala S, Bose J, Fuglsang AT, Pottosin I (2016) On a quest for stress tolerance genes: membrane transporters in sensing and adapting to hostile soils Journal of Experimental Botany 67(4):1015-1031.
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Honkanen S, Jones V, Morieri G, Champion C, Hetherington AJ, Kelly S, Proust H, Saint-Marcoux D, Prescott H, Dolan L (2016) The Mechanism Forming the Cell Surface of Tip-Growing Rooting Cells Is Conserved among Land Plants Current Biology 26(23):3238-3244.
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Percey WJ, Shabala L, Wu Q, Su N, Breadmore MC, Guijt RM, Bose J, Shabala S (2016) Potassium retention in leaf mesophyll as an element of salinity tissue tolerance in halophytes Plant Physiology 109.
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Percey WJ, McMinn A, Bose J, Breadmore MC, Guijt RM, Shabala S (2016) Salinity effects on chloroplast PSII performance in glycophytes and halophytes1 Functional Plant Biology 43.
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Honkanen S, Dolan L (2016) Growth regulation in tip-growing cells that develop on the epidermis. Current Opinion in Plant Biology 34:77-83.
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Caravia L, Collins C, Petrie PD, Tyerman SD (2016) Application of shade treatments during Shiraz berry ripening to reduce the impact of high temperature Australian Journal of Grape and Wine Research 22(3):422-437.
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Degaris KA, Walker RR, Loveys BR, Tyerman SD (2016) Comparative effects of deficit and partial root‐zone drying irrigation techniques using moderately saline water on ion partitioning in Shiraz and Grenache grapevines Australian Journal of Grape and Wine Research 22(2).
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Caravia L, Pagay V, Collins C, Tyerman SD (2016) Application of sprinkler cooling within the bunch zone during ripening of Cabernet Sauvignon berries to reduce the impact of high temperature Australian Journal of Grape and Wine Research 22.
2016
Burgess A, David R, Searle IR (2016) Deciphering the epitranscriptome: A green perspective. Journal of Integrative Plant Biology 58(10):822-835.
2016
Ramakrishnan S, Pokhrel S, Palani S, Pflueger C, Parnell TJ, Cairns BR, Bhaskara S, Chandrasekharan MB (2016) Counteracting H3K4 methylation modulators Set1 and Jhd2 co-regulate chromatin dynamics and gene transcription. Nature Communications 7:11949.
2016
Rengel Z, Bose J, Chen Q, Tripathi B (2016) Magnesium alleviates plant toxicity of aluminium and heavy metals Crop and Pasture Science 66(12):1298-1307.
2016
Sun YK, Flematti GR, Smith SM, Waters MT (2016) Reporter Gene-Facilitated Detection of Compounds in <i>Arabidopsis</i> Leaf Extracts that Activate the Karrikin Signaling Pathway. Frontiers in Plant Science 7:1799.
2016
Li B, Qiu J, Jayakannan M, Xu B, Li Y, Mayo GM, Tester M, Gilliham M, Roy SJ (2016) <i>AtNPF2.5</i> Modulates Chloride (Cl<sup>-</sup>) Efflux from Roots of <i>Arabidopsis thaliana</i>. Frontiers in Plant Science 7():2013.
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